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ChIP-seq with Bioconductor in R

中级技能水平
更新时间 2024年9月
Learn how to analyse and interpret ChIP-seq data with the help of Bioconductor using a human cancer dataset.
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RProbability & Statistics4 小时13 视频46 练习3,650 经验值5,261成就声明

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课程描述

ChIP-seq analysis is an important branch of bioinformatics. It provides a window into the machinery that makes the cells in our bodies tick. Whether it is a brain cell helping you to read this web page or an immune cell patrolling your body for microorganisms that would make you sick, they all carry the same genome. What differentiates them are the genes that are active at any given time. Which genes these are is determined by a complex system of proteins that can activate and deactivate genes. When this regulatory machinery gets out of control, it can lead to cancer and other debilitating diseases. ChIP-seq analysis allows us to understand the function of regulatory proteins, how they can contribute to disease and can provide insights into how we may be able to intervene to prevent cells from spinning out of control. In this course, you will explore a real dataset while learning how to process and analyze ChIP-seq data in R.

先决条件

Intermediate RIntroduction to Bioconductor in R
1

Introduction to ChIP-seq

Introduction to ChIP-seq experiments. Why are they interesting? What sort of phenomena can be studied with ChIP-seq and what can we learn from these experiments.
开始章节
2

Back to Basics - Preparing ChIP-seq data

3

Comparing ChIP-seq samples

4

From Peaks to Genes to Function

ChIP-seq with Bioconductor in R
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